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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 28, 2012 |
| Title |
Cell-type specific control of enhancer activity by H3K9 trimethylation |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
22633489 |
| Submission date |
Sep 26, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Dominic van Essen |
| Organization name |
Institute for Research on Cancer & Aging, Nice (IRCAN)
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| Lab |
Transcription specificity
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| Street address |
28 Avenue Valombrose
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| City |
Nice |
| ZIP/Postal code |
06107 |
| Country |
France |
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| Platforms (2) |
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
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| Samples (36)
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| GSM799198 |
WT DCs, unstimulated, biological rep 1 |
| GSM799199 |
WT DCs, 4h LPS-stimulated, biological rep 1 |
| GSM799200 |
JmjD2d knock-down DCs, 4h LPS-stimulated, biological rep 1 |
| GSM799201 |
WT DCs, unstimulated, biological rep 2 |
| GSM799202 |
WT DCs, 4h LPS-stimulated, biological rep 2 |
| GSM799203 |
JmjD2d knock-down DCs, 4h LPS-stimulated, biological rep 2 |
| GSM799204 |
WT DCs, unstimulated, biological rep 3 |
| GSM799205 |
WT DCs, 4h LPS-stimulated, biological rep 3 |
| GSM799206 |
JmjD2d knock-down DCs, 4h LPS-stimulated, biological rep 3 |
| GSM801503 |
H3K9me3_unstim_DC |
| GSM801504 |
H3K9me3_stim_DC |
| GSM801505 |
H3K9me3_unstim_3T3 |
| GSM801506 |
H3K9me3_stim_3T3 |
| GSM801507 |
input_unstim_DC |
| GSM801508 |
input_stim_DC |
| GSM801509 |
input_unstim_3T3 |
| GSM801510 |
input_stim_3T3 |
| GSM801527 |
JmjD2d_unstim_DC |
| GSM801528 |
JmjD2d_stim_DC |
| GSM801529 |
JmjD2_34_stim_DC |
| GSM801530 |
input_unstim_DC |
| GSM801531 |
input_stim_DC |
| GSM801532 |
H3K4me1_unstim_DC |
| GSM801533 |
H3K4me1_stim_DC |
| GSM801534 |
H3K4me1_unstim_3T3 |
| GSM801535 |
H3K4me1_stim_3T3 |
| GSM801536 |
H3K27ac_unstim_DC |
| GSM801537 |
H3K27ac_stim_DC |
| GSM801538 |
H3K27ac_unstim_3T3 |
| GSM801539 |
H3K27ac_stim_3T3 |
| GSM801540 |
H4ac_unstim_DC |
| GSM801541 |
H4ac_stim_DC |
| GSM801542 |
H4ac_unstim_3T3 |
| GSM801543 |
H4ac_stim_3T3 |
| GSM801544 |
input_unstim_3T3 |
| GSM801545 |
input_stim_3T3 |
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| This SuperSeries is composed of the following SubSeries:
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| GSE32255 |
JmjD2d-dependence of LPS-induced genes |
| GSE32377 |
Analysis of H3K9 trimethylation in unstimulated and stimulated dendritic cells and fibroblasts |
| GSE32379 |
Analysis of JmjD2d-bound regions in unstimulated and stimulated dendritic cells |
| GSE32380 |
Identification of candidate enhancer elements in unstimulated and stimulated dendritic cells and fibroblasts |
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| Relations |
| BioProject |
PRJNA147957 |
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