|
| Status |
Public on Nov 19, 2012 |
| Title |
Identification of candidate enhancer elements in unstimulated and stimulated dendritic cells and fibroblasts |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
To identify candidate enhancer elements we analyzed the distribution of two histone modifications associated with enhancers - H3K4me1 and H3K27ac - and one histone modification associated with active transcription - H4 acetylation.
|
| |
|
| Overall design |
ChIP-seq for H3K4me1, H3K27ac and H4ac, and input DNA controls, from 2 cell types (DCs & fibroblasts) under 2 conditions (unstimulated & stimulated)
|
| |
|
| Contributor(s) |
Zhu Y, van Essen D, Saccani S |
| Citation(s) |
22633489 |
| Submission date |
Sep 26, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Dominic van Essen |
| Organization name |
Institute for Research on Cancer & Aging, Nice (IRCAN)
|
| Lab |
Transcription specificity
|
| Street address |
28 Avenue Valombrose
|
| City |
Nice |
| ZIP/Postal code |
06107 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
|
| Samples (16)
|
|
| This SubSeries is part of SuperSeries: |
| GSE32381 |
Cell-type specific control of enhancer activity by H3K9 trimethylation |
|
| Relations |
| SRA |
SRP008521 |
| BioProject |
PRJNA154525 |
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