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Series GSE32377 Query DataSets for GSE32377
Status Public on Nov 19, 2012
Title Analysis of H3K9 trimethylation in unstimulated and stimulated dendritic cells and fibroblasts
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The distribution of H3K9me3 was analyzed in order to investigate the influence of H3K9me3 levels surrounding candidate enhancers and other cis-regulatory elements.
Overall design ChIP-seq for H3K9me3 and input DNA controls, from 2 cell types (DCs & fibroblasts) under 2 conditions (unstimulated & stimulated)
Contributor(s) Zhu Y, van Essen D, Saccani S
Citation(s) 22633489
Submission date Sep 26, 2011
Last update date May 15, 2019
Contact name Dominic van Essen
Organization name Institute for Research on Cancer & Aging, Nice (IRCAN)
Lab Transcription specificity
Street address 28 Avenue Valombrose
City Nice
ZIP/Postal code 06107
Country France
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (8)
GSM801503 H3K9me3_unstim_DC
GSM801504 H3K9me3_stim_DC
GSM801505 H3K9me3_unstim_3T3
This SubSeries is part of SuperSeries:
GSE32381 Cell-type specific control of enhancer activity by H3K9 trimethylation
SRA SRP008519
BioProject PRJNA154521

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32377_RAW.tar 160.3 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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