|
| Status |
Public on May 29, 2012 |
| Title |
Spt6 Levels are Modulated by PAAF1 and 26S Proteasome to Regulate the HIV-1 LTR and a Subset of Cellular Genes involved in Cancer. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Effect of PAAF1 and Spt6 knock-down on gene expression. Total RNAs were extracted from HeLa-LTR-Luc cells in which PAAF1 or Spt6 had been knock down by a specific siRNA or HeLa-LTR-Luc cells that had been transfected with a control siRNA (“si Neg”). Differentially expressed genes in PAAF1 knock-down cells were identified by microarray.
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| |
|
| Overall design |
Two biological replicates (A / B) in 3 experimental conditions (si-Neg, si-PAAF1, si-Spt6) were analyzed in a single channel experiment.
|
| |
|
| Contributor(s) |
Mari B, Barbry P, Lebrigand K, Kiernan R, Nakamura M |
| Citation(s) |
22316138 |
| Submission date |
Sep 09, 2011 |
| Last update date |
Nov 27, 2018 |
| Contact name |
Kevin Lebrigand |
| Organization name |
IPMC/CNRS
|
| Lab |
Functional Genomics Platform of Nice-Sophia-Antipolis, France.
|
| Street address |
660 route des lucioles
|
| City |
Valbonne - Sophia-Antipolis |
| ZIP/Postal code |
06560 |
| Country |
France |
| |
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| Platforms (1) |
| GPL13607 |
Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version) |
|
| Samples (6)
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| Relations |
| BioProject |
PRJNA147491 |
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