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Series GSE31970 Query DataSets for GSE31970
Status Public on Apr 30, 2012
Title Molecular Insights into Non-teratoma-forming Induced Pluripotent Stem Cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Human induced pluripotent stem (iPS) cells are capable of differentiating into derivatives of the three embryonic germ layers both in vitro and in vivo. To date the the molecular differences between teratoma-forming cells and non-teratoma-forming cells has not been analysed. A cell line, B1, bears typical ES cell-like morphology, expression of pluripotency-associated genes, and in vitro pluripotency capacity, but fails to form teratomas after subcutaneously injected into immune-deficient mice based on histological analysis. Besides histological analysis, we characterized the tumors derived from line B1, and teratomas derived from bona fida iPS and ES (line H1) cells respectively, using microarray-based gene expression analysis. The expression levels of pluripotency-associated markers in B1 cells were comparable to that in iPS and ES cells, while the complexity of tissue expression commitment was decreased upon spontaneous differentiation of B1 cells as compared to iPS and ES cells.
 
Overall design Total RNA obtained from HFF1 (human foreskin fibroblast) cells, line B1, iPS-A4, iPS-B4 and ES (line H1) cells, and their derived tumors in immune-deficient mice.
 
Contributor(s) Ying W
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Submission date Sep 07, 2011
Last update date Mar 20, 2017
Contact name Ying Wang
E-mail(s) wang_y@molgen.mpg.de
Phone 00493084131237
Organization name Max Planck Institute for Molecular Genetics
Department Vertebrate Genomics
Street address Ihnestrasse 63
City Berlin
ZIP/Postal code 14195
Country Germany
 
Platforms (1)
GPL6883 Illumina HumanRef-8 v3.0 expression beadchip
Samples (18)
GSM791809 HFF1 (rep 1)
GSM791810 HFF1 (rep 2)
GSM791811 iPS-A4 (rep 1)
Relations
BioProject PRJNA144975

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31970_RAW.tar 3.9 Mb (http)(custom) TAR
GSE31970_non-normalized_data.txt.gz 1.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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