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Series GSE31530 Query DataSets for GSE31530
Status Public on Feb 13, 2012
Title Transcriptome changes in IL-10 treated peritoneal macrophages
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To try to identify the mechanism of STAT3s indirect action we have used a genomic approach to map the binding sites of STAT3 within the genome and also used RNA-seq technology to map the changes in RNA expression and transcript isoform abundance in response to IL-10.
Overall design Examination of transcriptome changes in peritoneal macrophages when treated with IL-10 for 4 hours. RNA was extracted and sequenced.
Contributor(s) Hutchins AP, Miranda-Saavedra D
Citation(s) 22323479
Submission date Aug 19, 2011
Last update date May 15, 2019
Contact name Andrew P Hutchins
Organization name Southern University of Science and Technology
Department Bioinformatics
Lab Bioinformatics and Genomics
Street address 1088 Xueyuan Rd
City Shenzhen
ZIP/Postal code 518055
Country China
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM782668 RNA-seq of IL-10 treated macrophages
GSM782669 RNA-seq of Untreated macrophages
This SubSeries is part of SuperSeries:
GSE31531 Genome-wide analysis of STAT3-binding and gene expression changes in peritoneal macrophages upon interleukin-10 stimulation
SRA SRP007864
BioProject PRJNA154983

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Supplementary file Size Download File type/resource
GSE31530_RAW.tar 2.7 Gb (http)(custom) TAR (of BED, SAM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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