GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE31037 Query DataSets for GSE31037
Status Public on Aug 19, 2011
Title Small RNA sequencing in normal and psoriatic skin
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We report the application of Illumina small RNA sequencing to normal human skin, as well as uninvolved and involved psoriatic skin. By obtaining over 600 million qualified reads from 20 healthy controls and 47 psoriasis biopsies (uninvolved/involved), we have generated a complete small RNA profile in normal and diseased human skin, with particular emphasis on miRNAs. We report the discovery of 284 putative novel miRNAs as well as 98 differentially expressed miRNAs in psoriatic skin.
Overall design miRNA discovery and expression profiling in 67 normal and psoriatic human skin biopsies
Contributor(s) Bowcock A, Zhang W
Citation(s) 21807764
Submission date Jul 29, 2011
Last update date May 15, 2019
Contact name Xiang Zhou
Organization name Washington University in St. Louis
Department Computer Science and Engineering
Lab Zhang's lab (Computational Biology)
Street address Campus Box 1045, One Brookings Dr.
City Saint Louis
State/province MO
ZIP/Postal code 63130
Country USA
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (67)
GSM768941 Skin psoriasis involved 1
GSM768942 Skin psoriasis involved 2
GSM768943 Skin psoriasis involved 3
SRA SRP007825
BioProject PRJNA144911

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31037_RAW.tar 179.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap