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| Status |
Public on Sep 02, 2011 |
| Title |
Control of Embryonic Stem Cell Lineage Commitment by Core Promoter Factor, TAF3 |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
21884934 |
| Submission date |
Jul 26, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Devin Scannell |
| E-mail(s) |
devin.scannell@gmail.com
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| Phone |
001-510-666-3640
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| Organization name |
UC Berkeley
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| Department |
QB3
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| Lab |
Eisen
|
| Street address |
378 Stanley Hall #3220
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| City |
Berkeley |
| State/province |
CA |
| ZIP/Postal code |
94720 |
| Country |
USA |
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| Platforms (1) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
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| Samples (23)
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| GSM774943 |
TAF1 Mock IP, ES Cells |
| GSM774944 |
TBP Treatment IP, ES Cells |
| GSM774945 |
TBP/PolII Mock IP, ES Cells |
| GSM774946 |
PolII Treatment IP, ES Cells |
| GSM774955 |
ES Timepoint, TAF3 KO, replicate 1 |
| GSM774956 |
ES Timepoint, TAF3 Control, replicate 1 |
| GSM774957 |
ES Timepoint, TAF3 KO, replicate 2 |
| GSM774958 |
ES Timepoint, TAF3 Control, replicate 2 |
| GSM774959 |
EB Day3 Timepoint, TAF3 KO, replicate 1 |
| GSM774960 |
EB Day3 Timepoint, TAF3 Control, replicate 1 |
| GSM774961 |
EB Day3 Timepoint, TAF3 KO, replicate 2 |
| GSM774962 |
EB Day3 Timepoint, TAF3 Control, replicate 2 |
| GSM774963 |
EB Day6 Timepoint, TAF3 KO, replicate 1 |
| GSM774964 |
EB Day6 Timepoint, TAF3 Control, replicate 1 |
| GSM774965 |
EB Day6 Timepoint, TAF3 KO, replicate 2 |
| GSM774966 |
EB Day6 Timepoint, TAF3 Control, replicate 2 |
| GSM774967 |
ES Timepoint, TAF3 KO, PE, replicate 1 |
| GSM774968 |
ES Timepoint, TAF3 Control, PE, replicate 1 |
| GSM774969 |
ES Timepoint, TAF3 KO, PE, replicate 2 |
| GSM774970 |
ES Timepoint, TAF3 Control, PE, replicate 2 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE31270 |
Control of Embryonic Stem Cell Lineage Commitment by Core Promoter Factor, TAF3 (ChIP-Seq data) |
| GSE31271 |
Control of Embryonic Stem Cell Lineage Commitment by Core Promoter Factor, TAF3 (RNA-Seq data) |
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| Relations |
| BioProject |
PRJNA146237 |
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