NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE30816 Query DataSets for GSE30816
Status Public on Mar 05, 2012
Title CDK8 and MED12 knockdown in R1 mouse ES cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Transcriptional profiling of R1 mouse ES cells infected with non-targeting control (NTC) shRNA and two different shRNA sequences against Cdk8 (shCdk8-1 and shCdk-2) and Med12 (shMed12-1 and shMed12-2).
 
Overall design Multi-condition experiment comparing shNTC versus shCdk8-1 and shCdk8-2 after 8 days (3 biological replicates each) and shNTC versus shCdk8-1, shCdk8-2, shMed12-1, and shMed12-2 after 13 days (3 biological replicates each); in total 24 samples profiled.
 
Contributor(s) Adler AS, Modrusan Z
Citation(s) 22345154
Submission date Jul 20, 2011
Last update date Jan 12, 2017
Contact name Adam S Adler
E-mail(s) a.adler55@gmail.com
Organization name Genentech
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (24)
GSM764276 R1 shNTC replicate 1 - 8 days
GSM764277 R1 shNTC replicate 2 - 8 days
GSM764278 R1 shNTC replicate 3 - 8 days
This SubSeries is part of SuperSeries:
GSE30817 CDK8 knockdown in HT-29 cells and CDK8 & MED12 knockdown in R1 cells
Relations
BioProject PRJNA154571

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30816_RAW.tar 104.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap