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Series GSE30786 Query DataSets for GSE30786
Status Public on Jul 19, 2011
Title Determination of transcript abundance before and after serum induction in human HCT-116 colon cancer cell line.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptional regulation of developmentally controlled genes is at the heart of differentiation and organogenesis. In this study, we have performed mRNA transcript abdundance analyses in human cells in response to serum activation signal by RNA-seq.
Overall design mRNA transcript abundance determined before and after serum activation signals using two biological replicates.
Contributor(s) Lin C, Garrett AS, Shilatifard A
Citation(s) 21764852
Submission date Jul 19, 2011
Last update date May 15, 2019
Contact name Alexander (Garrett) Garruss
Organization name Stowers Institute for Medical Research
Lab Shilatifard
Street address 1000 East 50th Street
City Kansas CIty
State/province Missouri
ZIP/Postal code 64110
Country USA
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (4)
GSM763957 starved_1_RNAseq
GSM763958 starved_2_RNAseq
GSM763959 serum_1_RNAseq
This SubSeries is part of SuperSeries:
GSE30268 Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC).
SRA SRP007506
BioProject PRJNA154711

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30786_RAW.tar 1.1 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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