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Series GSE3066 Query DataSets for GSE3066
Status Public on Dec 05, 2005
Title Gene expression responses to a Salmonella infection in the chicken intestine differ between lines.
Organism Gallus gallus
Experiment type Expression profiling by array
Summary Poultry products are an important source of Salmonella enterica. An effective way to reduce food poisoning due to Salmonella would be to breed chickens more resistant to Salmonella. Unfortunately resistance to Salmonella is a complex trait with many factors involved. To learn more about Salmonella resistance mechanisms in young chickens, a cDNA microarray analysis was performed to compare gene expression profiles between a Salmonella susceptible and a more resistant chicken line. Newly hatched chickens were orally infected with S. enterica serovar Enteritidis. Since the intestine is the first barrier the bacteria encountersbacteria encounter after oral inoculation, gene expression was investigated in the intestine, from day 1 until day 21 post infection. Differences in gene expression between the susceptible and resistant chicken line were found in control as well as Salmonella infected conditions. In response to the Salmonella infection, the expression of different sets of genes seemed to be affected in the jejunum of the two chicken lines. In the susceptible line this included genes that affect T-cell activation, whereas in the more resistant line, at day 1, macrophage activation seemed to be more affected. At day 7 and 9 most gene expression differences between the two chicken lines were identified under control conditions, indicating a difference in the intestinal development between the two chicken lines which might be linked to the difference in Salmonella susceptibility. The findings in this study have lead to the identification of novel genes and possible cellular pathways of the host involved in Salmonella susceptibility.
Keywords: timecourse, disease
 
Overall design 8 timepoints with four groups for each timepoints. Pooled samples of 5 animals for each group. The different groups are:
slow growing control
slow growing salmonella
fast growing control
fast growing salmonella
Four comparisions for each timepoint: slow control- slow salmonella, fast control-fast salmonella, slow control-fast control, slow salmonella-fast salmonella. A dye-swap was done, so 8 slides for each timepoints, 64 arrays in total.
 
Contributor(s) van Hemert S, Hoekman AJ, Smits MA, Rebel JM
Citation(s) 16978708
Submission date Aug 05, 2005
Last update date Mar 16, 2012
Contact name Saskia van Hemert
E-mail(s) saskia.vanhemert@wur.nl
Organization name Animal Sciences Group
Street address PO box 65
City Lelystad
ZIP/Postal code 8200 AB
Country Netherlands
 
Platforms (1)
GPL2719 intestine-spleen combined array
Samples (64)
GSM67074 day21 slide1
GSM67075 d21slide2
GSM67076 d21slide3
Relations
BioProject PRJNA93159

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