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Series GSE30401 Query DataSets for GSE30401
Status Public on Jul 09, 2011
Title AlleleSeq: Analysis of Allele-Specific Expression and Binding in a Network Framework
Project ENCODE
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf

This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link http://www.ncbi.nlm.nih.gov/geo/info/ENCODE.html
 
Citation(s) 21811232
BioProject PRJNA143663
Submission date Jul 05, 2011
Last update date May 15, 2019
Contact name Joel Rozowsky
E-mail(s) rozowsky@csb.yale.edu
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (6)
GSM754330 Pol II ChIP-Seq
GSM754331 JunD ChIP-Seq
GSM754332 cFos ChIP-Seq
This SuperSeries is composed of the following SubSeries:
GSE30399 Genome wide mapping for TF binding sites for Pol II, JunD, cFos, Max & cMyc in GM12878 (ENCODE Project)
GSE30400 RNA-Seq in GM12878 (ENCODE Project)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE30401_RAW.tar 15.2 Gb (http)(custom) TAR (of BAM, NARROWPEAK, TAGALIGN)
SRA Run SelectorHelp

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