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Series GSE29405 Query DataSets for GSE29405
Status Public on May 07, 2012
Title Systems-wide RNAi analysis of CASP8AP2 / FLASH
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We have used a combination of RNAi based functional and molecular genomic approaches to investigate in detail two proteins required for the survival of CRC cells.
Overall design Set1 has 22 samples, 10 siNeg controls, 6 siRNA transfections for FLASH and NUP62 each. Set2 has 67 samples, siNeg controls at timepoint: 10hrs (5), 24hrs (6), 48hrs (6), 72hrs (5), siRNA FLASH at timepoint: 10hrs (8), 24hrs (8), 48hrs (8), 72hrs (8), untreated controls at timepoint: 10hrs (3), 24hrs (3), 48hrs (4), 72hrs (3).
Contributor(s) Hummon AB, Pitt JJ, Camps J, Skube SM, Huppi K, Jones TL, Beissbarth T, Kramer F, Grade M, Difilippantonio MJ, Ried T, Caplen NJ
Citation(s) 22216762
Submission date May 19, 2011
Last update date Feb 22, 2018
Contact name Frank Kramer
Organization name University Medical Center Göttingen
Department Department of Medical Statistics
Street address Humboldtallee 32
City Goettingen
ZIP/Postal code 37073
Country Germany
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (89)
GSM727178 negative control Set1_AllStar.0.1
GSM727179 negative control Set1_AllStar.0.2
GSM727180 negative control Set1_AllStar.0.3
BioProject PRJNA141543

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29405_RAW.tar 804.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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