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Series GSE29261 Query DataSets for GSE29261
Status Public on May 13, 2011
Title Cocaine-regulated expression of striatal microRNAs
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We cataloged miRNA expression in the nucleus accumbens and at striatal synapses in control and chronically cocaine-treated mice. We identified cocaine-responsive miRNAs, synaptically-enriched and depleted miRNA families, and confirmed cocaine-induced changes in protein expression for several predicted synaptic target genes.
Overall design Analysis of small RNA from Mus musculus nucleus accumbens (NAc) and postsynaptic densities (PSD) with and without chronic cocaine treatment.
Contributor(s) Eipper-Mains JE, Kiraly DD, Palakodeti D, Mains RE, Eipper BA, Graveley BR
Citation(s) 21708909
Submission date May 12, 2011
Last update date May 15, 2019
Contact name Brenton R Graveley
Phone 860-679-2090
Organization name University of Connecticut Health Center
Department Genetics and Genome Sciences
Street address 400 Farmington Avenue
City Farmington
State/province CT
ZIP/Postal code 06030-3301
Country USA
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (4)
GSM723280 NAc_saline_smallRNA
GSM723281 NAc_cocaine_smallRNA
GSM723282 PSD_saline_smallRNA
SRA SRP006784
BioProject PRJNA140265

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE29261_NAc_PSD_miRNAs_composite_data.v16.txt.gz 9.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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