NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE286226 Query DataSets for GSE286226
Status Public on Jan 10, 2025
Title Endogenous fine-mapping of functional regulatory elements in complex genetic loci in HAP1
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 09, 2025
Last update date Jan 10, 2025
Contact name Ke Zhao
E-mail(s) zk8584918@gmail.com
Organization name Tianjin Medical University
Street address Qixiangtai Road, No.22
City Tianjin
ZIP/Postal code 05000
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (59)
GSM8702781 HAP1,wild-type,ATAC
GSM8702782 HAP1-KRAB, non-targeting control (NTC) sgRNA, ATAC-seq
GSM8702783 HAP1-KRAB, sgRNA targeted rs73156934-tagged CRE, ATAC-seq
This SuperSeries is composed of the following SubSeries:
GSE285458 Endogenous fine-mapping of functional regulatory elements in complex genetic loci in HAP1 [ATAC-seq]
GSE285461 Endogenous fine-mapping of functional regulatory elements in complex genetic loci in HAP1 [scRNA-seq]
GSE285718 Endogenous fine-mapping of functional regulatory elements in complex genetic loci in HAP1 [CUT&Tag]
Relations
BioProject PRJNA1208702

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE286226_RAW.tar 11.9 Gb (http)(custom) TAR (of BIGWIG, BW, H5, MTX, TSV, TXT, WIG)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap