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Series GSE27507 Query DataSets for GSE27507
Status Public on Oct 06, 2011
Title Gene expression in pluripotent stem cells derived after somatic cell genome transfer into human oocytes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The exchange of the oocyte’s genome with the genome of a somatic cell, followed by the derivation of pluripotent stem cells, could enable the generation of specific cell types affected in degenerative human diseases. Such cells, carrying the patient’s genome, might be useful for cell replacement. Here we report that the development of human oocytes activated after genome exchange invariably arrests at the late cleavage stages in association with transcriptional abnormalities. In contrast, if the oocyte genome is not removed and the somatic cell genome is merely added, they efficiently develop to the blastocyst stage. Human stem cell lines derived from these blastocysts differentiate into cell types of all three germ layers, and a pluripotent gene expression program is established on the genome derived from the somatic cell. This result demonstrates the feasibility of reprogramming human cells using oocytes and identifies the removal of the oocyte genome as the primary cause of developmental failure after genome exchange. Future work should focus on the critical elements that are associated with the human oocyte genome.
 
Overall design Stem cells were derived by reprogramming of skin cells using oocytes ('nuclear transfer') or defined factors (iPS cells), or from IVF blastocysts
 
Contributor(s) Egli D
Citation(s) 21979046
Submission date Feb 24, 2011
Last update date Mar 20, 2017
Contact name Dieter Egli
E-mail(s) degli@nyscf.org
Phone 617 4968659
Organization name The New York Stem Cell Foundation Research Institute
Department NYSCF
Lab Egli
Street address 3960 Broadway
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (1)
GPL6883 Illumina HumanRef-8 v3.0 expression beadchip
Samples (14)
GSM679523 Fibroblast skin donor 1
GSM679524 soPS1
GSM679525 soPS1 biological duplicate
This SubSeries is part of SuperSeries:
GSE28024 Human oocytes reprogram somatic cells to a pluripotent state
Relations
BioProject PRJNA141865

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27507_RAW.tar 3.9 Mb (http)(custom) TAR
GSE27507_non-normalized_data.txt.gz 2.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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