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Series GSE271133 Query DataSets for GSE271133
Status Public on Aug 01, 2024
Title Oncogenic SLC2A11-MIF Fusion Protein Interacts with PTBP1 to Facilitate Bladder Cancer Proliferation and Metastasis by Regulating mRNA Stability
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To further identify the underlying mechanisms of SLC2A11-MIF in bladder cancer progress, we performed genome-wide RNA expression profile screening in which we compared gene expression profiles in SLC2A11-MIF-knockdown and control cells in T24 or UM-UC-3
 
Overall design Bladder cancer cells T24 or UM-UC-3 were treated with SiRNA or control for 48h, respectively. The RNA of the treated cells was extracted and sequenced on Illumina NovaseqTM 6000 platform and 150-bp paired-end reads were generated.
 
Contributor(s) Cheng L, Li H, Chen X, Huang J
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Submission date Jun 30, 2024
Last update date Aug 01, 2024
Contact name Liang Cheng
E-mail(s) chengl33@mail2.sysu.edu.cn
Phone 18819254083
Organization name Sun Yat-sen Memorial Hospital
Department Department of Urology
Street address 107th Yanjiangxi Road
City Guangzhou
State/province Guangdong
ZIP/Postal code 510000
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (6)
GSM8370249 T24si-Ctrl
GSM8370250 T24si-SM-1
GSM8370251 T24si-SM-2
Relations
BioProject PRJNA1130034

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE271133_RAW.tar 3.3 Mb (http)(custom) TAR (of XLSX)
SRA Run SelectorHelp
Raw data are available in SRA

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