|
| Status |
Public on Jan 26, 2011 |
| Title |
differential gene expression in Sensitive and Resistant Pig to Escherichia coli F18 |
| Organism |
Sus scrofa |
| Experiment type |
Expression profiling by array
|
| Summary |
An M307 G/A point mutation of FUT1 gene has been considered as a usful marker to select the piglets that are sensitive(GG/AG genotype) or resistant(AA) to Escherichia coli F18 in foreign pig breeds.However,it is not suitable to Chinese native breeds. Duodenal tissues were collected from 8 full-sib pairs of Sutai pigs (a new hybrid between the Duroc and Taihu breeds) at the age of 28-day differing in adhesion phenotype to find the differential genes that can be used as the candidate genes fit for Chinese native breeds.
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| Overall design |
piglets at the age of 28-day sensitive (GG/AG genotype) to Escherichia coli F18 vs resistant(AA) ones.Biological replicates:8 full-sib pairs of Sutai pigs (4 pairs for GG/AA genotype of FUT1 gene, 4 pairs for AG/AA genotype)
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| |
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| Contributor(s) |
Bao W, Ye L |
| Citation(s) |
29363554, 27809935 |
| |
| Submission date |
Jan 25, 2011 |
| Last update date |
Jul 16, 2019 |
| Contact name |
Lan Ye |
| E-mail(s) |
lanye5001_5891@yahoo.com.cn
|
| Organization name |
Yangzhou university
|
| Department |
animal science and technology
|
| Street address |
Daxue Road NO 88
|
| City |
Yangzhou |
| State/province |
Jiangsu |
| ZIP/Postal code |
225009 |
| Country |
China |
| |
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| Platforms (1) |
| GPL10162 |
Agilent-020109 Porcine Gene Expression Microarray (44K) (Probe Name version) |
|
| Samples (8)
|
| GSM661178 |
10192_1_512GG_vs_524AA-Replicate 1 |
| GSM661179 |
10192_2_2134GG_vs_2129AA-Replicate 2 |
| GSM661180 |
10192_3_2383GG_vs_2385AA-Replicate 3 |
| GSM661181 |
10192_4_2383GG_vs_2387AA-Replicate 4 |
| GSM661182 |
10193_1_2381AG_vs_2391AA-Replicate 1 |
| GSM661183 |
10193_2_5152AG_vs_302AA-Replicate 2 |
| GSM661184 |
10193_3_5377AG_vs_5156AA-Replicate 3 |
| GSM661185 |
10193_4_5381AG_vs_5379AA-Replicate 4 |
|
| Relations |
| BioProject |
PRJNA135979 |
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