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Status |
Public on Jun 24, 2024 |
Title |
scRNA-seq of aortas from mice with Wnk1 deletion in vascular smooth muscle cells (experiment 1) |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Other
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Summary |
scRNA-seq of total cells from aortas of mice with Wnk1 deletion in vascular smooth muscle cells
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Overall design |
We performed single-cell RNA-seq analysis of total cells viable cells from aortas of mice with Wnk1 deletion in vascular smooth muscle cells ------------------------------------- MultiSeq Barcode Barcode Sequence Hashtagged Sample BC8 CCTTGGCACCCGAGAATTCCACGAGATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA Sm22Cre(-)Wnk1(lox/lox) 1 BC9 CCTTGGCACCCGAGAATTCCAGTAGCACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA Sm22Cre(-)Wnk1(lox/lox) 2 BC10 CCTTGGCACCCGAGAATTCCACGACCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA Sm22Cre(-)Wnk1(lox/lox) 3 BC11 CCTTGGCACCCGAGAATTCCATTAGCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA Sm22Cre(+)Wnk1(lox/lox) 1 BC13 CCTTGGCACCCGAGAATTCCACCAACCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA Sm22Cre(+)Wnk1(lox/lox) 2 BC14 CCTTGGCACCCGAGAATTCCATGACCGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA Sm22Cre(+)Wnk1(lox/lox) 3 BC15 CCTTGGCACCCGAGAATTCCAGCAACGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA Sm22Cre(+)Wnk1(lox/lox) 4
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Contributor(s) |
Cochain C, Saliba A |
Citation missing |
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Submission date |
Apr 24, 2024 |
Last update date |
Jun 25, 2024 |
Contact name |
Alexander M. Leipold |
Organization name |
Helmholtz Institute for RNA-based Infection Research
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Lab |
Saliba Lab
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Street address |
Josef-Schneider-Str. 2
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City |
Würzburg |
ZIP/Postal code |
97080 |
Country |
Germany |
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Platforms (1) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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Samples (4)
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GSM8228615 |
Library 1: Sm22Cre(-)Wnk1(lox/lox) aortas, GEX |
GSM8228616 |
Library 1: Sm22Cre(-)Wnk1(lox/lox) aortas, MULTIseq |
GSM8228617 |
Library 2: Sm22Cre(+)Wnk1(lox/lox) aortas, GEX |
GSM8228618 |
Library 2: Sm22Cre(+)Wnk1(lox/lox) aortas, MULTIseq |
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Relations |
BioProject |
PRJNA1104151 |