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Series GSE26344 Query DataSets for GSE26344
Status Public on Dec 01, 2011
Title In vitro models of glioblastoma (GBM)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Characterization of gene expression for a panel of 50 in vitro and in vivo models of glioblastoma (GBM). Models include subcutaneously established xenograft lines, orthotopically grown subcutaneously established
xenograft lines, serum derived cell lines and stem cell media derived cell lines. Multiple replicates of each line were run on different dates to determine the effect of batch and processing date on reproducibility of
gene expression profiles
 
Overall design 117 samples analyzed from 50 distinct GBM xenografts or cell lines. Biological replicates from the same passage number were included for many, but not all, of the lines.
Web link http://www.genome.duke.edu/labs/nevins/ReevesSupplement1
 
Contributor(s) Reeves JW, Lucas J, Gatza M, Keir S, Persson OB, Reardon D, Kanaly C, Nevins JR
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 29, 2010
Last update date Dec 06, 2018
Contact name Jason W Reeves
E-mail(s) jwr11@duke.edu
Organization name Duke University
Lab Nevins, Joseph
Street address 101 Science Dr
City Durham
State/province North Carolina
ZIP/Postal code 27710
Country USA
 
Platforms (1)
GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array
Samples (117)
GSM646905 Xenograft 08-695, biological rep 1
GSM646906 Xenograft 08-695, biological rep 2
GSM646907 Xenograft 08-499, biological rep 1
Relations
BioProject PRJNA136927

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26344_RAW.tar 212.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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