NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE262740 Query DataSets for GSE262740
Status Public on Aug 07, 2024
Title LAG3 and PD1 synergize on CD8+ T cells to drive T cell exhaustion and hinder autocrine IFN gamma-dependent anti-tumor immunity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary Combined nivolumab (anti-PD1) and relatlimab (anti-LAG3) have shown enhanced effectiveness in melanoma patients. However, how these two receptors work together to hinder anti-tumor immunity remains unclear. Our study demonstrates that PD1/LAG3-deficient CD8+ T cells with more effectively clearing tumors and survive longer in melanoma mouse models. These PD1/LAG3-deficient CD8+ T cells have unique transcriptional profiles, broad TCR clonality, and enriched effector-like and interferon-responsive genes, leading to increased IFN gamma release indicating functionality. PD1 and LAG3 together drive T cell exhaustion, with a significant impact on TOX modulation. Mechanistically, autocrine IFN gamma signaling is crucial for enhancing anti-tumor immunity in PD1/LAG3-deficient CD8+ T cells, providing insights into the enhanced efficacy of combined PD1 and LAG3 targeting.
 
Overall design We employed single-cell RNA sequencing to profile CD8 cells from polyclonal/pMEL mice, both with and without single or double deficiencies of PD1 or LAG3. This comprehensive approach aimed to gain a deeper understanding of the enhanced efficacy observed in the melanoma model.
Web link https://www.cell.com/cell/abstract/S0092-8674(24)00776-1
 
Contributor(s) Andrews LP, Cui J, Vignali DA
Citation(s) 39121848
Submission date Mar 28, 2024
Last update date Aug 10, 2024
Contact name Jian Cui
E-mail(s) cuij@pitt.edu
Organization name University of Pittsburgh
Department Immunology
Lab Vignali Lab
Street address 5051 Centre Avenue
City Pittsburgh
State/province PA
ZIP/Postal code 15261
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (5)
GSM8174729 polyclonal CD8 cells gene expression
GSM8174730 polyclonal CD8 cells citeseq hashtages
GSM8174731 polyclonal CD8 cells TCR seq
Relations
BioProject PRJNA1093086

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE262740_HTO_details.txt.gz 316 b (ftp)(http) TXT
GSE262740_RAW.tar 143.3 Mb (http)(custom) TAR (of CSV, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap