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| Status |
Public on Feb 19, 2024 |
| Title |
The single cell RNAseq analysis of regenerated mouse lung in mouse-rat interspecies |
| Organism |
Mus musculus x Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
we report the application of single cell RNAseq analysis of mouse lung from E20.5 Nkx2-1-/- rat (mutant), and mouse-rat chimeric lung from E20.5 wt rat (control).
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| Overall design |
The mouse lung from Nkx2-1-/- rat (mutant) and mouse-rat chimeric lung from wt rat (control) were prepared from E20.5 mouse-rat interspecies. The samples were dissociated into small pieces and digested into single cell suspension which used to prepare single cell RNA 3' v3 library for sequencing with 10X Genomics platform.
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| Contributor(s) |
Kalinichenko V, Li E, Wen B |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Feb 16, 2024 |
| Last update date |
Feb 19, 2024 |
| Contact name |
Enhong Li |
| E-mail(s) |
lienhong0808@gmail.com
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| Organization name |
The University of Arizona
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| Department |
Child Health
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| Lab |
Kalinichenko Lab
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| Street address |
475 N 5th st
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| City |
PHOENIX |
| State/province |
AZ |
| ZIP/Postal code |
85004 |
| Country |
USA |
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| Platforms (1) |
| GPL34201 |
Illumina NovaSeq 6000 (Mus musculus x Rattus norvegicus) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA1077322 |
