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Series GSE255953 Query DataSets for GSE255953
Status Public on Feb 17, 2024
Title Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium]
Organism Mus musculus
Experiment type Other
Summary Here, we examined diversity in the cell-type composition of the mouse anterior thalamic nuclei (ATN) using single-cell RNA-seq and single-cell spatial transcriptomics.
 
Overall design Examination of anterior thalamic nuclei neuron transcriptomes.
 
Contributor(s) Cembrowski M
Citation(s) 38427564
Submission date Feb 16, 2024
Last update date Apr 28, 2024
Contact name Mark Steven Cembrowski
Organization name University of British Columbia
Department Cellular and Physiological Sciences
Lab Cembrowski
Street address 2350 Health Sciences Mall
City Vancouver
State/province BC
ZIP/Postal code V6S0B7
Country Canada
 
Platforms (1)
GPL33896 Xenium In Situ Analyzer: Mouse
Samples (7)
GSM8083339 output-XETG00098__0018569__rep1_atn_ant__20231129__015936
GSM8083340 output-XETG00098__0018569__rep1_atn_int__20231129__015936
GSM8083341 output-XETG00098__0018569__rep1_atn_post__20231129__015936
Relations
BioProject PRJNA1077302

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE255953_RAW.tar 14.5 Gb (http)(custom) TAR (of TAR)
GSE255953_countsTableXenium.txt.gz 31.2 Mb (ftp)(http) TXT
GSE255953_metadataXenium.txt.gz 4.5 Mb (ftp)(http) TXT
GSE255953_xen_atn_analysis.rds.gz 1.2 Gb (ftp)(http) RDS

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