GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE253716
Query DataSets for GSE253716
Status
Public on May 01, 2024
Title
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
Has this study been published? Please
login
to update or
notify GEO
.
Submission date
Jan 19, 2024
Last update date
May 01, 2024
Contact name
David Huang
Organization name
National Cancer Institute
Street address
9000 Rockville Pike
City
Bethesda
State/province
Maryland
ZIP/Postal code
20892-0001
Country
USA
Platforms (3)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL30172
NextSeq 2000 (Mus musculus)
GPL30173
NextSeq 2000 (Homo sapiens)
Samples (99)
Less...
More...
GSM8026731
SKMM1 4 hours (ATAC2) DMSO 1
GSM8026732
SKMM1 4 hours (ATAC2) DMSO 2
GSM8026733
SKMM1 4 hours (ATAC2) FHD286 1
GSM8026734
SKMM1 4 hours (ATAC2) FHD286 2
GSM8026735
SKMM1 4 hours (ATAC2) Trametinib 1
GSM8026736
SKMM1 4 hours (ATAC2) Tranetinib 2
GSM8026737
SKMM1 4 hours (ATAC2) combination 1
GSM8026738
SKMM1 4 hours (ATAC2) combination 2
GSM8026739
NCIH929 4 hours (ATAC2) DMSO 1
GSM8026740
NCIH929 4 hours (ATAC2) DMSO 2
GSM8026741
NCIH929 4 hours (ATAC2) FHD286 1
GSM8026742
NCIH929 4 hours (ATAC2) FHD286 2
GSM8026743
NCIH929 4 hours (ATAC2) Trametinib 1
GSM8026744
NCIH929 4 hours (ATAC2) Tranetinib 2
GSM8026745
NCIH929 4 hours (ATAC2) combination 1
GSM8026746
NCIH929 4 hours (ATAC2) combination 2
GSM8026774
SKMM1 4 hours (ATAC1) DMSO 1
GSM8026775
SKMM1 4 hours (ATAC1) DMSO 2
GSM8026776
SKMM1 4 hours (ATAC1) AU15330 1
GSM8026777
SKMM1 4 hours (ATAC1) AU15330 2
GSM8026778
NCIH929 4 hours (ATAC1) DMSO 1
GSM8026779
NCIH929 4 hours (ATAC1) DMSO 2
GSM8026780
NCIH929 4 hours (ATAC1) AU15330 1
GSM8026781
NCIH929 4 hours (ATAC1) AU15330 2
GSM8026782
SKMM1 IRF4 1
GSM8026783
SKMM1 IRF4 2
GSM8026784
SKMM1 MYC 1
GSM8026785
SKMM1 MYC 2
GSM8026786
SKMM1 ARID1A 1
GSM8026787
SKMM1 ARID1A 2
GSM8026788
SKMM1 BRG1 1
GSM8026789
SKMM1 BRG1 2
GSM8026790
SKMM1 SMARCB1 1
GSM8026791
SKMM1 SMARCB1 2
GSM8026792
SKMM1 H3K4me3 1
GSM8026793
SKMM1 H3K4me3 2
GSM8026794
SKMM1 H3K27ac 1
GSM8026795
SKMM1 H3K27ac 2
GSM8026796
SKMM1 isotype control 1
GSM8026797
SKMM1 isotype control 2
GSM8026798
NCIH929 IRF4 1
GSM8026799
NCIH929 IRF4 2
GSM8026800
NCIH929 MYC 1
GSM8026801
NCIH929 MYC 2
GSM8026802
NCIH929 ARID1A 1
GSM8026803
NCIH929 ARID1A 2
GSM8026804
NCIH929 BRG1 1
GSM8026805
NCIH929 BRG1 2
GSM8026806
NCIH929 SMARCB1 1
GSM8026807
NCIH929 SMARCB1 2
GSM8026808
NCIH929 H3K4me3 1
GSM8026809
NCIH929 H3K4me3 2
GSM8026810
NCIH929 H3K27ac 1
GSM8026811
NCIH929 H3K27ac 2
GSM8026812
NCIH929 isotype control 1
GSM8026813
NCIH929 isotype control 2
GSM8026814
SKMM1 (CUT&RUN1) NT 1
GSM8026815
SKMM1 (CUT&RUN1) NT 2
GSM8026816
SKMM1 (CUT&RUN1) IRF4 sg1 1
GSM8026817
SKMM1 (CUT&RUN1) IRF4 sg1 2
GSM8026818
SKMM1 (CUT&RUN1) IRF4 sg2 1
GSM8026819
SKMM1 (CUT&RUN1) IRF4 sg2 2
GSM8026856
SKMM1 (CUT&RUN2) ARID1A DMSO 1
GSM8026857
SKMM1 (CUT&RUN2) ARID1A DMSO 2
GSM8026858
SKMM1 (CUT&RUN2) ARID1A AU15330 1
GSM8026859
SKMM1 (CUT&RUN2) ARID1A AU15330 2
GSM8026860
SKMM1 (CUT&RUN2) IRF4 DMSO 1
GSM8026861
SKMM1 (CUT&RUN2) IRF4 DMSO 2
GSM8026862
SKMM1 (CUT&RUN2) IRF4 AU15330 1
GSM8026863
SKMM1 (CUT&RUN2) IRF4 AU15330 2
GSM8026864
naive ARID1A 1
GSM8026865
naive ARID1A 2
GSM8026866
naive isotype 1
GSM8026867
naive isotype 2
GSM8026868
GCB ARID1A 1
GSM8026869
GCB ARID1A 2
GSM8026870
GCB ARID1A 3
GSM8026871
GCB isotype 1
GSM8026872
GCB isotype 2
GSM8026873
PC ARID1A 1
GSM8026874
PC ARID1A 2
GSM8026875
PC ARID1A 3
GSM8026876
PC isotype
GSM8026877
SKMM1 6 hours DMSO 1
GSM8026878
SKMM1 6 hours DMSO 2
GSM8026879
SKMM1 6 hours AU15330 1
GSM8026880
SKMM1 6 hours AU15330 2
GSM8026881
NCIH929 6 hours DMSO 1
GSM8026882
NCIH929 6 hours DMSO 2
GSM8026883
NCIH929 6 hours AU15330 1
GSM8026884
NCIH929 6 hours AU15330 2
GSM8026885
SKMM1 24 hours DMSO 1
GSM8026886
SKMM1 24 hours DMSO 2
GSM8026887
SKMM1 24 hours AU15330 1
GSM8026888
SKMM1 24 hours AU15330 2
GSM8026889
NCIH929 24 hours DMSO 1
GSM8026890
NCIH929 24 hours DMSO 2
GSM8026891
NCIH929 24 hours AU15330 1
GSM8026892
NCIH929 24 hours AU15330 2
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE253703
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma (ATAC-Seq human 16)
GSE253706
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma (ATAC-Seq human 8)
GSE253707
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma (CUT&RUN human 32)
GSE253708
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma (CUT&RUN human 6)
GSE253711
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma (CUT&RUN human 8).
GSE253712
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma (CUT&RUN mouse 13)
GSE253713
IRF4 requires ARID1A to establish plasma cell identity in multiple myeloma (RNA-Seq human 16).
Relations
BioProject
PRJNA1066800
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary data files not provided
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|