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Series GSE251868 Query DataSets for GSE251868
Status Public on May 29, 2024
Title TWEAK/Fn14 signalling in Breast Cancer (HER2 H3K27ac ChIP-seq)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This study explores the transcriptiomic and epigenetic roles of TWEAK/Fn14 signalling in Breast Cancer
 
Overall design HER2 breast cancer cell lines were treated with TWEAK for 48h then harvested for H3K27ac ChIP-seq
 
Contributor(s) Sim N, Li Y
Citation(s) 38965263
Submission date Dec 21, 2023
Last update date Sep 09, 2024
Contact name Yinghui Li
E-mail(s) liyh@ntu.edu.sg
Organization name Nanyang Technological University
Department School of Biological Sciences
Lab 05n-21
Street address 60 Nanyang Drive
City Singapore
State/province Singapore
ZIP/Postal code 637551
Country Singapore
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (10)
GSM7989319 SKBR3_UT_K27_rep1
GSM7989320 SKBR3_UT_K27_rep2
GSM7989321 SKBR3_TWEAK_K27_rep1
This SubSeries is part of SuperSeries:
GSE231483 TWEAK/Fn14 signalling in Breast Cancer
Relations
BioProject PRJNA1055579

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE251868_RAW.tar 1.5 Gb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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