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Series GSE249667 Query DataSets for GSE249667
Status Public on Feb 15, 2024
Title Characterisation of ILCs isolated from Mtb infected mice lungs
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary ILCs were sorted from the lungs of Mtb infected mice at 5 and 14 days post infection and subjected to sc-RNA sequencing to determine gene signature profile
 
Overall design 10 mice were pooled per sample per time point. Total 2 samples for 2 time points.
 
Contributor(s) Khader S, Das S
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Submission date Dec 08, 2023
Last update date Feb 16, 2024
Contact name Shabaana Khader
E-mail(s) khader@uchicago.edu
Organization name The University of Chicago
Street address 920 East 58th Street
City Chicago
State/province Illinois
ZIP/Postal code 60637
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM7957026 ILC, D5, scRNAseq
GSM7957027 ILC, D14, scRNAseq
Relations
BioProject PRJNA1050155

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE249667_RAW.tar 33.4 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA

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