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Series GSE24904 Query DataSets for GSE24904
Status Public on Jul 05, 2012
Title Snail regulates MyoD binding-site occupancy to direct enhancer switching and differentiation-specific transcription in myogenesis
Organism Mus musculus
Experiment type Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Contributor(s) Soleimani VD, Rudnicki MA
Citation(s) 22771117, 30016497
Submission date Oct 25, 2010
Last update date Jul 24, 2019
Organization Ottawa Hospital Research Institute
Phone (613) 737-8899 -73255
Department Cellular and Molecular Medicine
Lab Ottawa Bioinformatics Core Facility
Street address 501 Smyth Rd.
City Ottawa
State/province ON
ZIP/Postal code K1H 8L6
Country Canada
Platforms (3)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
GPL9250 Illumina Genome Analyzer II (Mus musculus)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (27)
GSM610848 Cycling myoblasts - Replicate 1
GSM610849 Cycling myoblasts - Replicate 2
GSM610850 Cycling myoblasts - Replicate 3
This SuperSeries is composed of the following SubSeries:
GSE24811 Time Series of gene expression during the course of myogenic differentiation in mouse skeletal muscle cells
GSE24852 ChIP-Seq of Myf5, MyoD, Snai1, HDAC1, HDAC2, E47 and empty vector controls in mouse skeletal myoblasts or myotubes
GSE38236 RNA-seq data of si-Snai1, si-Snai2, si-Snai1/2 and si-Scrambled treated mouse primary myoblasts
BioProject PRJNA132093

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24904_RAW.tar 7.9 Gb (http)(custom) TAR (of BW, CEL, TXT)
SRA Run SelectorHelp

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