|
|
GEO help: Mouse over screen elements for information. |
|
Status |
Public on Jan 01, 2024 |
Title |
Lineage-specific intolerance to oncogenic drivers restricts histological transformation |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
This SuperSeries is composed of the SubSeries listed below.
|
|
|
Overall design |
Refer to individual Series
|
|
|
Citation(s) |
38330136 |
|
Submission date |
Nov 19, 2023 |
Last update date |
Apr 02, 2024 |
Contact name |
Ashley M Laughney |
E-mail(s) |
ashley.laughney@gmail.com
|
Organization name |
Weill Cornell Medicine
|
Department |
Physiology, Biophysics, and Systems Biology
|
Lab |
Laughney Lab
|
Street address |
413 East 69th Street
|
City |
NEW YORK |
State/province |
New York |
ZIP/Postal code |
10021 |
Country |
USA |
|
|
Platforms (2) |
GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
Samples (42)
|
GSM7908319 |
Lung, de novo LUAD, rep 1 |
GSM7908320 |
Lung, de novo LUAD, rep 2 |
GSM7908321 |
Lung, de novo LUAD, rep 3 |
GSM7908322 |
Lung, de novo SCLC, pooled |
GSM7908323 |
Lung, de novo LUAD, pooled |
GSM7908324 |
Lung, LUAD treated with osi, time1, pooled |
GSM7908325 |
Lung, LUAD off DOX, time 1, pooled |
GSM7908326 |
Lung, SCLC genotype, AT2 origin, pooled |
GSM7908327 |
Lung, SCLC genotype, Pten loss, AT2 origin, time 1, pooled |
GSM7908328 |
Lung, SCLC genotype, Pten loss, AT2 origin, time 2, pooled |
GSM7908329 |
Lung, LUAD off DOX, time 2, pooled |
GSM7908330 |
Lung, LUAD restarted on DOX, pooled |
GSM7908331 |
Lung, LUAD off DOX, time 3, pooled |
GSM7908332 |
Lung, de novo LUAD, Rb1 wt, pooled |
GSM7908333 |
Lung, de novo LUAD, Rb1 wt, off DOX, pooled |
GSM7908334 |
Lung, de novo LUAD, Myc wt, pooled |
GSM7908335 |
Lung, Normal AT2, pooled |
GSM7908336 |
Lung, Normal PNEC, pooled |
GSM7908337 |
Lung, Normal AT2, Pten loss, pooled |
GSM7908338 |
Lung, Normal AT2, Myc transgene, pooled |
GSM7908339 |
Lung, Normal PNEC, Myc transgene, pooled |
GSM7908340 |
Lung, Normal AT2, Pten loss, Myc transgene, pooled |
GSM7908341 |
Lung, AT2, EGFR, Tp53 and Pten loss, pooled |
GSM7908342 |
Lung, AT2, EGFR, Tp53 and Pten loss, Myc transgene, pooled |
GSM7908367 |
Lung, PNEC origin, LUAD genotype, chromatin, pooled |
GSM7908368 |
Lung, de novo SCLC, chromatin, rep 1 |
GSM7908369 |
Lung, de novo SCLC, chromatin, rep 2 |
GSM7908370 |
Lung, AT2 origin, SCLC genotype, chromatin, pooled |
GSM7908371 |
Lung, de novo LUAD, chromatin, rep 1 |
GSM7908372 |
Lung, de novo LUAD, chromatin, rep 2 |
GSM7908373 |
Lung, de novo LUAD, chromatin, rep 3 |
GSM7908374 |
Lung, AT2 origin, WT, chromatin, rep 1 |
GSM7908375 |
Lung, AT2 origin, WT, chromatin, rep 2 |
GSM7908376 |
Lung, AT2 origin, Pten loss, chromatin, rep 1 |
GSM7908377 |
Lung, AT2 origin, Pten loss, chromatin, rep 2 |
GSM7908378 |
Lung, AT2 origin, Pten E545K, chromatin, rep 1 |
GSM7908379 |
Lung, AT2 origin, Pten E545K, chromatin, rep 2 |
GSM7908380 |
Lung, AT2 origin, Pten H1047R, chromatin, rep 1 |
GSM7908381 |
Lung, AT2 origin, Pten H1047R, chromatin, rep 2 |
|
This SuperSeries is composed of the following SubSeries: |
GSE248202 |
Lineage-specific intolerance to oncogenic drivers restricts histological transformation [scRNA-Seq] |
GSE248206 |
Lineage-specific intolerance to oncogenic drivers restricts histological transformation [ATAC-Seq] |
|
Relations |
BioProject |
PRJNA1042808 |
|
|
|
|
|