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Series GSE247946 Query DataSets for GSE247946
Status Public on Dec 31, 2024
Title Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 15, 2023
Last update date Dec 31, 2024
Contact name Andy Chen
E-mail(s) yhc@stanford.edu
Organization name Stanford University
Street address 240 Pasteur Rd
City Stanford
ZIP/Postal code 94305
Country USA
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (132)
GSM7903335 Bone marrow-derived macrophage-CTR_rep1
GSM7903336 Bone marrow-derived macrophage-CTR_rep2
GSM7903337 Bone marrow-derived macrophage-IFNG_rep1
This SuperSeries is composed of the following SubSeries:
GSE247938 Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation [ATAC-Seq]
GSE247939 Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation [ChIP-Seq]
GSE247940 Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation [Hi-C]
Relations
BioProject PRJNA1040945

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE247946_RAW.tar 27.5 Gb (http)(custom) TAR (of BW, HIC)
SRA Run SelectorHelp

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