NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE245679 Query DataSets for GSE245679
Status Public on Oct 23, 2023
Title Characterization of the genes that were regulated by feeding with Lactococcus kimchii
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary In the present study, we investigated the effect of Lactococcus kimchii on healthspan using Caenorhabditis elegans as a model animal. The healthspan of the adult C. elegans fed the mixture of E. coli OP50 and Lactococcus kimchii was significantly longer than that of animals fed sole OP50 (control). Transcriptional profiling comparing Lactococcus kimchii- and control-fed animals suggested that genes related to insulin-like signaling pathway were upregulated by Lactococcus kimchii.
 
Overall design Transcriptional profiling of three-day-old worms that were fed OP50 or the mixture of OP50 and Lactococcus kimchii for five days, by deep sequencing, using Illumina HiSeq.
 
Contributor(s) Kage-Nakadai E
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 18, 2023
Last update date Oct 23, 2023
Contact name Eriko Kage-Nakadai
E-mail(s) nakadai@omu.ac.jp
Organization name Osaka Metropolitan Univ.
Street address 3-3-138, Sugimoto, Sumiyoshi-ku
City Osaka
State/province Osaka
ZIP/Postal code 558-8585
Country Japan
 
Platforms (1)
GPL22765 Illumina HiSeq 4000 (Caenorhabditis elegans)
Samples (4)
GSM7846852 Bristol N2_OP50_rep1
GSM7846853 Bristol N2_OP50_rep2
GSM7846854 Bristol N2_OPLK_rep1
Relations
BioProject PRJNA1029572

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE245679_RAW.tar 10.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap