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Series GSE245529 Query DataSets for GSE245529
Status Public on Jul 11, 2024
Title KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac
Organism Solanum lycopersicum
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38968127
Submission date Oct 16, 2023
Last update date Jul 12, 2024
Contact name Jing An
Organization name Universite Paris Saclay
Street address 630 Rue Noetzlin
City Paris
ZIP/Postal code 91190
Country France
 
Platforms (2)
GPL21762 Illumina NextSeq 500 (Solanum lycopersicum)
GPL27957 Illumina NovaSeq 6000 (Solanum lycopersicum)
Samples (47)
GSM7844490 M82 ChIP-seq_Pol2 Rep1
GSM7844491 M82 ChIP-seq_H3K4ac Rep1
GSM7844492 M82 ChIP-seq_H3K4me1 Rep1
This SuperSeries is composed of the following SubSeries:
GSE245525 KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ChIP-seq]
GSE245527 KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [Hi-C]
GSE245528 KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [RNA-seq]
Relations
BioProject PRJNA1028665

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE245529_RAW.tar 4.3 Gb (http)(custom) TAR (of BIGWIG, BROADPEAK, NARROWPEAK)
SRA Run SelectorHelp
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