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Series GSE243778 Query DataSets for GSE243778
Status Public on Sep 27, 2023
Title Postnatal Subventricular Zone Injury Predicts Motor Impairment in Preterm Infants Following Intestinal Disease
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Following intestinal perforation in neonatal mice there is an injury to the subventrcular zone stem cell niche. These files are the raw data from mouse SVZ in controls and mice with modeled instestinal perforation.
 
Overall design On postnatal day 5, mice were divided into controls and modeled intestinal perforation. After 48 hours, the SVZ was dissected for single nuclear RNAseq.
 
Contributor(s) Benner EJ, Epstein A, Jain V, Gregory SG
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Submission date Sep 21, 2023
Last update date Sep 28, 2023
Contact name Adrian Aryeh Epstein
E-mail(s) adrian.epstein@duke.edu
Organization name Duke Univeristy School of Medicine
Department Pediatrics
Lab Duke Molecular Physiology Institute
Street address 300 N Duke St
City Durham
State/province NC
ZIP/Postal code 27701
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM7795592 Healthy Mouse SVZ p7
GSM7795593 MIP Mouse SVZ p7
Relations
BioProject PRJNA1019798

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE243778_RAW.tar 307.2 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA

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