NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE24346 Query DataSets for GSE24346
Status Public on Jan 28, 2013
Title Identification of differentially expressed genes in Sfmbt1-knockdown C2C12 myoblasts
Organism Mus musculus
Experiment type Expression profiling by array
Summary Gene expression profiling was performed to identify Sfmbt1-dependent regulation in myogenic programs. To establish the magnitude of the Sfmbt1 effect on muscle cells, we have compared gene expression profiles of C2C12 cells transduced with lentiviruses expressing scramble shRNA control or shSfmbt1. Our analysis suggested that Sfmbt1 critically confers transcriptional silencing of muscle genes in myogenic progenitor cells.
 
Overall design Two biological replicates for each sample group: C2C12 cells stably transduced with pLKO.1 expressing scramble shRNA control and C2C12 cells transduced with pLKO.1 shSFMBT1. Samples were independently cultured and RNAs were then harvested for microarray analysis.
 
Contributor(s) Li JL, Wu L
Citation(s) 23349461
Submission date Sep 24, 2010
Last update date Jul 11, 2024
Contact name Lizi Wu
Organization name University of Florida
Street address 2033 Mowry Road
City Gainesville
State/province FL
ZIP/Postal code 32610
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (4)
GSM1022834 Vector control, biological rep1
GSM1022835 Vector control, biological rep2
GSM1022836 SFMBT1 knock-down, biological rep1
Relations
BioProject PRJNA177954

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24346_RAW.tar 17.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap