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Series GSE240326 Query DataSets for GSE240326
Status Public on Jun 13, 2024
Title An in situ method for identification of transcriptome-wide protein-RNA interactions in cells
Organisms Homo sapiens; Mus musculus
Experiment type Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Aug 08, 2023
Last update date Jun 14, 2024
Contact name Brian Yee
E-mail(s) brian.alan.yee@gmail.com
Organization name UCSD
Department Health
Lab Yeo
Street address 9500 Gilman Dr
City La Jolla
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (7)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (78)
GSM7679828 PFA_HEK293T_RBFOX2_STAMP_replicate1
GSM7679829 PFA_HEK293T_RBFOX2_STAMP_replicate2
GSM7679830 PFA_HEK293T_RBFOX2_STAMP_replicate3
This SuperSeries is composed of the following SubSeries:
GSE240014 An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [in_situ_STAMP]
GSE240325 An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [in_situ_STAMP - Long-Read]"
GSE240521 An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [eCLIP-seq ]
Relations
BioProject PRJNA1003311

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE240326_RAW.tar 518.5 Mb (http)(custom) TAR (of BED, BW, TSV)
SRA Run SelectorHelp

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