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Series GSE240326 Query DataSets for GSE240326
Status Public on Jun 13, 2024
Title An in situ method for identification of transcriptome-wide protein-RNA interactions in cells
Organisms Homo sapiens; Mus musculus
Experiment type Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 39152130
Submission date Aug 08, 2023
Last update date Sep 27, 2024
Contact name Brian Yee
E-mail(s) brian.alan.yee@gmail.com
Organization name UCSD
Department Health
Lab Yeo
Street address 9500 Gilman Dr
City La Jolla
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (7)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (78)
GSM7679828 PFA_HEK293T_RBFOX2_STAMP_replicate1
GSM7679829 PFA_HEK293T_RBFOX2_STAMP_replicate2
GSM7679830 PFA_HEK293T_RBFOX2_STAMP_replicate3
This SuperSeries is composed of the following SubSeries:
GSE240014 An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [in_situ_STAMP]
GSE240325 An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [in_situ_STAMP - Long-Read]"
GSE240521 An in situ method for identification of transcriptome-wide protein-RNA interactions in cells [eCLIP-seq ]
Relations
BioProject PRJNA1003311

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE240326_RAW.tar 518.5 Mb (http)(custom) TAR (of BED, BW, TSV)
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