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Series GSE239725 Query DataSets for GSE239725
Status Public on Jan 31, 2024
Title Dynamic histone modifications establish the two phase kinetics of glucosinolates against wounding stress in Arabidopsis plant
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary This study demonstrates that distinct composition of histone modifications between aliphatic and indolic GSL pathway genes contribute to the two phase activation of two different groups of GSL pathway genes in stress condition of Arabidopsis.
 
Overall design Performed RNA-seq analysis between untreated control and wound-treated time course samples (harvested at 6 hrs, 12 hrs, 24 hrs, 3 days, 5 days after wounding treatment).
 
Contributor(s) Choi D, Lee SW, Kim DH
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 31, 2023
Last update date Jan 31, 2024
Contact name Dasom Choi
E-mail(s) somich429@gmail.com
Organization name Chung-Ang University
Street address 4726, Seodong-daero
City Anseong-si
State/province Gyeonggi-do
ZIP/Postal code 17546
Country South Korea
 
Platforms (1)
GPL26208 Illumina NovaSeq 6000 (Arabidopsis thaliana)
Samples (18)
GSM7670510 0h-1
GSM7670511 0h-2
GSM7670512 0h-3
Relations
BioProject PRJNA1000626

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE239725_RAW.tar 317.3 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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