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Series GSE23867 Query DataSets for GSE23867
Status Public on Oct 28, 2010
Title Epigenetic profile of the Plasmodium falciparum intraerythrocytic cycle
Organism Plasmodium falciparum 3D7
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This experiment characterizes the localisation of H2A.Z, H3K9ac and H3K4me3 in the epigenome of the human malaria parasite, P. falciparum at 4 different stages of intraerythrocytic development.
Overall design Examination of H2A.Z, H3K9ac, H3K4me3 and mono-nucleosomal input in 3D7 strain at 4 different stages and H2A in 3D7 strain at 1 stage using native ChIP-seq
Contributor(s) Bartfai R, Hoeijmakers WA, Salcedo-Amaya AM, Smits AH, Janssen-Megens E, Kaan A, Treeck M, Gilberger T, Fran├žoijs K, Stunnenberg HG
Citation(s) 21187892
Submission date Aug 30, 2010
Last update date May 15, 2019
Contact name H.G. Stunnenberg
Phone +31-24-3610520
Organization name Radboud University
Department Department of Molecular Biology (274)
Street address Geert Grooteplein 28
City Nijmegen
ZIP/Postal code 6525 GA
Country USA
Platforms (1)
GPL10866 Illumina Genome Analyzer II (Plasmodium falciparum 3D7)
Samples (17)
GSM588510 P.falciparum_3D7_ChIPseq_H2A.Z_10hpi
GSM588511 P.falciparum_3D7_ChIPseq_H2A.Z_20hpi
GSM588512 P.falciparum_3D7_ChIPseq_H2A.Z_30hpi
This SubSeries is part of SuperSeries:
GSE23787 H2A.Z Demarcates Intergenic Regions of the Plasmodium falciparum Epigenome That Are Dynamically Marked by H3K9ac and H3K4me3
SRA SRP003508
BioProject PRJNA133173

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Supplementary file Size Download File type/resource
GSE23867_RAW.tar 735.1 Mb (http)(custom) TAR (of BED, GFF)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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