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Series GSE23636 Query DataSets for GSE23636
Status Public on Aug 16, 2010
Title Population genetic structure of the Ashkenazi Jewish population
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary The Ashkenazi Jewish population has long been considered a genetic isolate and presumed to have the genetic signatures of founder effects and isolation. We genotyped a large cohort of Ashkenazi Jews and analyzed their genetic structure compared to other worldwide populations.
Overall design We genotyped 471 normal control Ashkenazi Jewish individuals with the Affymetrix 6.0 array and analyzed their genetic structure relative to other Europe and worldwide populations. We measured heterozygosity, linkage disequilibrium, identity-by-descent and used extended haplotype tests of positive selection.
Contributor(s) Steven M. B, Stephen T. W
Citation(s) 20798349
Submission date Aug 16, 2010
Last update date Nov 27, 2018
Contact name Steven M Bray
Organization name Emory University School of Medicine
Department Human Genetics
Street address 615 Michael Street
City Atlanta
State/province GA
ZIP/Postal code 30322
Country USA
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (471)
GSM579413 AJ_1A2
GSM579414 AJ_1A3
GSM579415 AJ_1A5
BioProject PRJNA130941

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource 7.1 Mb (ftp)(http) MAP
GSE23636_AJ_471_732k.ped.gz 204.2 Mb (ftp)(http) PED
GSE23636_AJ_471_732k_readme.txt.gz 605 b (ftp)(http) TXT
GSE23636_RAW.tar 15.2 Gb (http)(custom) TAR (of CEL)
Processed data are available on Series record

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