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Series GSE234032 Query DataSets for GSE234032
Status Public on Mar 01, 2024
Title Telomeric Chromosomal Instability Fosters Paracrine Mediated Cell Competition to Initiate Intestinal Cancer [bulk RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Telomere dysfunction drives chromosomal instability (CIN) during the transition from benign adenoma to malignant adenocarcinoma. While CIN provides a mutator mechanism for cancer- relevant genomic events, its role in shaping tumor biology during carcinogenesis is not well understood. Here, we explored the molecular and biological impact of telomere dysfunction and associated CIN in vivo in a faithful model of CRC. In vivo lineage tracing revealed that CIN increased the rate of neoplastic cell clonal expansion through accelerated differentiation of neighboring stem cells, resulting in increased number of adenomas and decreased survival in CIN-high Apcmin mice. Mechanistically, CIN represses EZH2 leading to upregulation of secreted Wnt antagonists, which resulted in a growth advantage to CIN-high neoplastic cells. Correspondingly, pharmacological activation of intrinsic WNT signaling enhanced intestinal stem cells fitness, leading to reduced neoplastic cell clonal expansion and adenoma burden. Thus, the CIN-EZH2-WNT axis enhances intestinal cancer initiation in the nascent tumor microenvironment, providing a preventive strategy for patients harboring germline APC mutations.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for CIN-low and CIN-high Apcmin colonoids.
 
Contributor(s) LaBella K
Citation(s) 38574731
Submission date Jun 02, 2023
Last update date Jun 03, 2024
Contact name Jiexi Li
E-mail(s) JLi24@mdanderson.org
Organization name The University of Texas MD Anderson Cancer Center
Street address 1881 East Road
City Houston
State/province TX
ZIP/Postal code 77054
Country USA
 
Platforms (1)
GPL28457 DNBSEQ-G400 (Mus musculus)
Samples (4)
GSM7441408 G0_1
GSM7441409 G0_2
GSM7441410 G2_1
This SubSeries is part of SuperSeries:
GSE234033 Telomeric Chromosomal Instability Fosters Paracrine Mediated Cell Competition to Initiate Intestinal Cancer
Relations
BioProject PRJNA979218

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE234032_DES_G0_G2_mouse.txt.gz 312.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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