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Series GSE233891 Query DataSets for GSE233891
Status Public on Jan 16, 2024
Title Circadian RNA-seq dataset in nhr-23 knockldown strain.
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary C. elegans were cultivated under temperature cycles for circadian entraiment. Then, we depleted NHR-23 using auxin-induced degron system, and sampled worms under constant(CC) condition every 2 h.
Overall design Circadian transcriptome anaysis of nhr-23 knockdown and control condition, at 12 h time points with 2 replicates.
Contributor(s) Hiroki S
Citation(s) 38418700
Submission date Jun 01, 2023
Last update date Mar 11, 2024
Contact name Shingo Hiroki
Organization name Tokyo Metropolitan Instituite of Medical Sciences
Lab Circadian clock lab
Street address 2-1-6 Kamikitazawa
City Setagaya-ku
State/province Tokyo
ZIP/Postal code 156-8506
Country Japan
Platforms (1)
GPL30091 DNBSEQ-G400 (Caenorhabditis elegans)
Samples (48)
GSM7438635 Mock, CT1_rep1
GSM7438636 Mock, CT1_rep2
GSM7438637 Mock, CT3_rep1
BioProject PRJNA978523

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Supplementary file Size Download File type/resource
GSE233891_RNA-seq_Result.xlsx 12.4 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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