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| Status |
Public on Sep 22, 2023 |
| Title |
Systematic identification of RNA-binding proteins and tethered domains that activate exon splicing inclusion |
| Organism |
Homo sapiens |
| Experiment type |
Other
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
May 16, 2023 |
| Last update date |
Sep 22, 2023 |
| Contact name |
Brian Yee |
| E-mail(s) |
brian.alan.yee@gmail.com
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| Organization name |
UCSD
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| Department |
Health
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| Lab |
Yeo
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| Street address |
9500 Gilman Dr
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| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92093 |
| Country |
USA |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (35)
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| GSM7359776 |
HEK293T cells, TRNAU1AP_IP_2 |
| GSM7359777 |
HEK293T cells, RTCA_IN_1 |
| GSM7359778 |
HEK293T cells, RTCA_IN_2 |
| GSM7359779 |
HEK293T cells, RTCA_IP_1 |
| GSM7359780 |
HEK293T cells, RTCA_IP_2 |
| GSM7359781 |
HEK293T cells, SCAF8_IN_1 |
| GSM7359782 |
HEK293T cells, SCAF8_IN_2 |
| GSM7359783 |
HEK293T cells, SCAF8_IP_1 |
| GSM7359784 |
HEK293T cells, SCAF8_IP_2 |
| GSM7359785 |
HEK293T cells, STAU2_IN_1 |
| GSM7359786 |
HEK293T cells, STAU2_IN_2 |
| GSM7359787 |
HEK293T cells, STAU2_IP_1 |
| GSM7359788 |
HEK293T cells, STAU2_IP_2 |
| GSM7359793 |
HEK293T cells, FLAG_IN_1 |
| GSM7359794 |
HEK293T cells, FLAG_IN_2 |
| GSM7359795 |
HEK293T cells, FLAG_IP_1 |
| GSM7359796 |
HEK293T cells, FLAG_IP_2 |
| GSM7359797 |
HEK293T cells, shTRNAU1AP, Rep1 |
| GSM7359798 |
HEK293T cells, shTRNAU1AP, Rep2 |
| GSM7359799 |
HEK293T cells, shTRNAU1AP, Rep3 |
| GSM7359800 |
HEK293T cells, shRTCA, Rep1 |
| GSM7359801 |
HEK293T cells, shRTCA, Rep2 |
| GSM7359802 |
HEK293T cells, shRTCA, Rep3 |
| GSM7359803 |
HEK293T cells, shSCAF8, Rep1 |
| GSM7359804 |
HEK293T cells, shSCAF8, Rep2 |
| GSM7359805 |
HEK293T cells, shSCAF8, Rep3 |
| GSM7359806 |
HEK293T cells, shSTAU2, Rep1 |
| GSM7359807 |
HEK293T cells, shSTAU2, Rep2 |
| GSM7359808 |
HEK293T cells, shSTAU2, Rep3 |
| GSM7359812 |
HEK293T cells, shNT, Rep1 |
| GSM7359813 |
HEK293T cells, shNT, Rep2 |
| GSM7359814 |
HEK293T cells, shNT, Rep3 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE232597 |
Systematic identification of RNA-binding proteins and tethered domains that activate exon splicing inclusion [eCLIP-seq] |
| GSE232598 |
Systematic identification of RNA-binding proteins and tethered domains that activate exon splicing inclusion [RNA-seq] |
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| Relations |
| BioProject |
PRJNA972974 |
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