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Series GSE232490 Query DataSets for GSE232490
Status Public on Nov 20, 2023
Title A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS
Organisms Homo sapiens; Mus musculus
Experiment type Other
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series

Grant ID: NIH T32 AI007512
Grant title: Molecular Basis of Allergic and Immunologic Disease
Affiliation: Children's Hospital
Name: Yeguang Hu
 
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NIH grant(s)
Grant ID Grant title Affiliation Name
R01 HL140622 Ikaros regulation: Study on hemolymphopoiesis MASSACHUSETTS GENERAL HOSPITAL Katia Georgopoulos
R01 AR069132 Epigenetic regulation of proinflammatory responses in the skin MASSACHUSETTS GENERAL HOSPITAL Katia Georgopoulos
R56 AR082402 Epigenetic regulation of epidermal proinflammatory responses MASSACHUSETTS GENERAL HOSPITAL Katia Georgopoulos
R35 GM128938 Studying the function of human genetic variation in the light of 3D genome organization LA JOLLA INSTITUTE FOR IMMUNOLOGY Ferhat Ay
R21 AR074748 Molecular genetics of eccrine sweat gland development MASSACHUSETTS GENERAL HOSPITAL Bruce A Morgan
R01 AI150860 Role of CXCR4 in immunoglobulin light chain recombination UNIVERSITY OF CHICAGO Marcus Ramsay Clark
Submission date May 13, 2023
Last update date Mar 13, 2024
Contact name Katia Georgopoulos
E-mail(s) katia.georgopoulos@cbrc2.mgh.harvard.edu
Phone 617-7264445
Organization name Harvard Medical School
Department CBRC
Lab Georgopoulos
Street address 1st and 13th St
City Charlestown
State/province MA
ZIP/Postal code 02129
Country USA
 
Platforms (5)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL21626 NextSeq 550 (Mus musculus)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (120)
GSM7305473 Large preB, WT, rep 1
GSM7305474 Large preB, IKDN, rep 1
GSM7305475 Large preB, WT, rep 2
This SuperSeries is composed of the following SubSeries:
GSE231876 A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS [HiC_LpreB_Steadystate]
GSE231877 A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS [HiC_LpreB_Inducible_deletion]
GSE231878 A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS [Hi-C_HaCaT]
Relations
BioProject PRJNA972312

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE232490_RAW.tar 54.7 Gb (http)(custom) TAR (of BEDGRAPH, BW, HIC, TBI)
SRA Run SelectorHelp

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