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GEO accession:
Series GSE232430
Query DataSets for GSE232430
Status
Public on Jul 22, 2024
Title
Identifications of vernalization regulatory elements by epigenomic approaches in winter wheat
Organism
Triticum aestivum
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
39080779
Submission date
May 12, 2023
Last update date
Aug 26, 2024
Contact name
Zefu Lu
E-mail(s)
luzefu@live.com
Organization name
Institute of Crop Sciences
Street address
No.12 Zhongguancun South St.,Haidian District, Beijing, P.R.China
City
Beijing
State/province
Haidian
ZIP/Postal code
100081
Country
China
Platforms (1)
GPL25409
Illumina NovaSeq 6000 (Triticum aestivum)
Samples (46)
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More...
GSM7333164
ATAC-Seq Leaf_rep1
GSM7333165
ATAC-Seq Leaf_rep2
GSM7333166
ATAC-Seq Axillary_bud_rep1
GSM7333167
ATAC-Seq Axillary_bud_rep2
GSM7333168
ATAC-Seq Shoot_apex_rep1
GSM7333169
ATAC-Seq Shoot_apex_rep2
GSM7333170
ATAC-Seq Vernalized_leaf_rep1
GSM7333171
ATAC-Seq Vernalized_leaf_rep2
GSM7333172
ATAC-Seq Vernalized_axillary_bud_rep1
GSM7333173
ATAC-Seq Vernalized_axillary_bud_rep2
GSM7333174
ATAC-Seq Vernalized_shoot_apex_rep1
GSM7333175
ATAC-Seq Vernalized_shoot_apex_rep2
GSM7333176
ATAC-Seq Input_rep1
GSM7333177
ATAC-Seq Input_rep2
GSM7333182
ChIP-Seq Leaf_H3K27ac_rep1
GSM7333183
ChIP-Seq Leaf_H3K27ac_rep2
GSM7333184
ChIP-Seq Leaf_H3K27me3_rep1
GSM7333185
ChIP-Seq Leaf_H3K27me3_rep2
GSM7333186
ChIP-Seq Leaf_H3K36me3_rep1
GSM7333187
ChIP-Seq Leaf_H3K36me3_rep2
GSM7333188
ChIP-Seq Leaf_H3K4me3_rep1
GSM7333189
ChIP-Seq Leaf_H3K4me3_rep2
GSM7333190
ChIP-Seq Vernalized_leaf_H3K27ac_rep1
GSM7333191
ChIP-Seq Vernalized_leaf_H3K27ac_rep2
GSM7333192
ChIP-Seq Vernalized_leaf_H3K27me3_rep1
GSM7333193
ChIP-Seq Vernalized_leaf_H3K27me3_rep2
GSM7333194
ChIP-Seq Vernalized_leaf_H3K36me3_rep1
GSM7333195
ChIP-Seq Vernalized_leaf_H3K36me3_rep2
GSM7333196
ChIP-Seq Vernalized_leaf_H3K4me3_rep1
GSM7333197
ChIP-Seq Vernalized_leaf_H3K4me3_rep2
GSM7333198
ChIP-Seq Leaf_input_rep1
GSM7333199
ChIP-Seq Vernalized_leaf_input_rep1
GSM7333200
ChIP-Seq Vernalized_leaf_input_rep2
GSM7333207
RNA-Seq Leaf_rep1
GSM7333208
RNA-Seq Leaf_rep2
GSM7333209
RNA-Seq Axillary_bud_rep1
GSM7333210
RNA-Seq Axillary_bud_rep2
GSM7333211
RNA-Seq Shoot_apex_rep1
GSM7333212
RNA-Seq Shoot_apex_rep2
GSM7333213
RNA-Seq Vernalized_leaf_rep1
GSM7333214
RNA-Seq Vernalized_leaf_rep2
GSM7333215
RNA-Seq Vernalized_axillary_bud_rep1
GSM7333216
RNA-Seq Vernalized_axillary_bud_rep2
GSM7333217
RNA-Seq Vernalized_shoot_apex_rep1
GSM7333218
RNA-Seq Vernalized_shoot_apex_rep2
GSM8290469
ChIP-Seq Leaf_input_rep2
This SuperSeries is composed of the following SubSeries:
GSE232424
Identifications of vernalization regulatory elements by epigenomic approaches in winter wheat (ATAC-Seq)
GSE232426
Identifications of vernalization regulatory elements by epigenomic approaches in winter wheat (ChIP-Seq)
GSE232428
Identifications of vernalization regulatory elements by epigenomic approaches in winter wheat (RNA-Seq)
Relations
BioProject
PRJNA971967
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE232430_RAW.tar
18.7 Gb
(http)
(custom)
TAR (of BED, BW, TXT)
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