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Series GSE230771 Query DataSets for GSE230771
Status Public on Mar 05, 2024
Title Differential Effects of JAK1 vs. JAK2 Inhibition in Mouse Models of Hemophagocytic Lymphohistiocytosis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Hemophagocytic lymphohistiocytosis (HLH) comprises a severe hyperinflammatory phenotype driven by the overproduction of cytokines, many of which signal via the JAK/STAT pathway. Indeed, the JAK1/2 inhibitor ruxolitinib has demonstrated efficacy in pre-clinical studies and early-phase clinical trials in HLH. Nevertheless, concerns remain for ruxolitinib-induced cytopenias, which are postulated to result from the blockade of JAK2-dependent hematopoietic growth factors. To explore the therapeutic effects of selective JAK inhibition in mouse models of HLH, we carried out studies incorporating the JAK1 inhibitor itacitinib, the JAK2 inhibitor fedratinib and the JAK1/2 inhibitor ruxolitinib. All three drugs were well-tolerated and at the doses tested, they suppressed interferon-gamma (IFNg)-induced STAT1 phosphorylation in vitro and in vivo. Itacitinib, but not fedratinib, significantly improved survival and clinical scores in CpG-induced secondary HLH. Conversely, in primary HLH, where perforin-deficient (Prf1-/-) mice are infected with lymphocytic choriomeningitis virus (LCMV), itacitinib and fedratinib performed suboptimally. Ruxolitinib demonstrated excellent clinical efficacy in both HLH models. RNA-sequencing of splenocytes from LCMV-infected Prf1-/- mice revealed that itacitinib targeted inflammatory and metabolic pathway genes in CD8 T cells, while fedratinib targeted genes regulating cell proliferation and metabolism. In monocytes, neither drug conferred major transcriptional impacts. Consistent with its superior clinical effects, ruxolitinib exerted the greatest transcriptional changes in CD8 T cells and monocytes, targeting more genes across several biologic pathways, most notably JAK-dependent pro-inflammatory signaling. We conclude that JAK1 inhibition is sufficient to curtail CpG-induced disease, but combined inhibition of JAK1 and JAK2 is needed to best control LCMV-induced immunopathology.
 
Overall design RNA sequencing analysis of CD8 T cells and CD11b+ Ly6C+Ly6G- monocytes sorted on day 9 p.i. from Prf1-/- naïve mice, LCMV-infected untreated, or treated in vivo with itacitinib, fedratinib, or ruxolitinib (day 4-8 p.i.)
 
Contributor(s) Keenan C, Oak N, Nichols KE
Citation(s) 38446698
Submission date Apr 27, 2023
Last update date Jun 06, 2024
Contact name Kim Nichols
E-mail(s) kim.nichols@stjude.org
Organization name St. Jude Children's Research Hospital
Department Oncology
Lab Nichols Lab
Street address 262 Danny Thomas Pl
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (30)
GSM7234090 CD8_Prf1_Naive_1 2511402_01
GSM7234091 CD8_Prf1_Naive_2 2511403_02
GSM7234092 CD8_Prf1_Naive_3 2511404_03
Relations
BioProject PRJNA962548

Download family Format
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MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230771_GRCm38.primary_assembly.genome.fa.fai.txt.gz 1.7 Kb (ftp)(http) TXT
GSE230771_GRCm38.primary_assembly.genome.fa.gz 769.1 Mb (ftp)(http) FA
GSE230771_NICHOLS-286021-STRANDED_RSEM_gene_count.2022-12-28_21-53-34.txt.gz 952.7 Kb (ftp)(http) TXT
GSE230771_NICHOLS-286021-STRANDED_RSEM_gene_count.2023-01-04_20-06-35.txt.gz 769.7 Kb (ftp)(http) TXT
GSE230771_NICHOLS-286023-UNSTRANDED_RSEM_gene_count.2023-01-05_00-24-44.txt.gz 797.6 Kb (ftp)(http) TXT
GSE230771_NICHOLS-286023-UNSTRANDED_RSEM_gene_count.2023-01-05_03-14-00.txt.gz 1.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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