 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 18, 2023 |
| Title |
Effect of S1P on gene expression in human primary keratinocytes |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To investigate the effect of the sphingolipid S1P secreted by melanoma cells on epidermal keratinocytes, we treated human primary keratinocytes with exogenous S1P.
|
| |
|
| Overall design |
We performed gene expression profiling analysis using data obtained from RNA-seq of HPK treated or not with S1P (1µM) for 24 h. Each condition was performed in 5 replicates.
|
| |
|
| Contributor(s) |
Noujarède J, Carrié L, Genais M, Riond J, Andrieu-Abadie N |
| Citation(s) |
38113139 |
| |
| Submission date |
Apr 19, 2023 |
| Last update date |
Mar 18, 2024 |
| Contact name |
Nathalie ANDRIEU-ABADIE |
| E-mail(s) |
nathalie.andrieu@inserm.fr
|
| Organization name |
INSERM
|
| Department |
UMR1037
|
| Lab |
The Cancer Research Center of Toulouse
|
| Street address |
2 Avenue Hubert Curien
|
| City |
Toulouse |
| ZIP/Postal code |
31037 |
| Country |
France |
| |
|
| Platforms (1) |
|
| Samples (10)
|
| GSM7184527 |
Human primary keratinocytes, not treated, 24 h, rep1 |
| GSM7184528 |
Human primary keratinocytes, not treated, 24 h, rep2 |
| GSM7184529 |
Human primary keratinocytes, not treated, 24 h, rep3 |
| GSM7184530 |
Human primary keratinocytes, not treated, 24 h, rep4 |
| GSM7184531 |
Human primary keratinocytes, not treated, 24 h, rep5 |
| GSM7184532 |
Human primary keratinocytes, treated 1µM S1P 24 h, rep1 |
| GSM7184533 |
Human primary keratinocytes, treated 1µM S1P 24 h, rep2 |
| GSM7184534 |
Human primary keratinocytes, treated 1µM S1P 24 h, rep3 |
| GSM7184535 |
Human primary keratinocytes, treated 1µM S1P 24 h, rep4 |
| GSM7184536 |
Human primary keratinocytes, treated 1µM S1P 24 h, rep5 |
|
| Relations |
| BioProject |
PRJNA957274 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE230050_RAW.tar |
22.4 Mb |
(http)(custom) |
TAR (of RESULTS) |
| GSE230050_expected_counts_RSEM.txt.gz |
483.4 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
| Processed data are available on Series record |
|
|
|
|
 |
Less...
More...