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Series GSE229711 Query DataSets for GSE229711
Status Public on Apr 05, 2024
Title The cellular landscape of the healthy human intervertebral disc: identification of new immature cell populations and their relationship with mature populations at single cell resolution
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary For this study, we applied scRNA-seq to cells from surgically separated annulus fibrosus and nucleus pulposus tissues to identify A) thecellular landscapes of healthytissues, and B) characterize in detail the composition andgene regulatory networksof immature cell populations.
Overall design Single cell level analysis of annulus fibrosus and nucleus pulposus tissues from human healthy (n=3, n=3) intervertebral discs (IVDs).
Contributor(s) Mertens J, Swahn H, Olmer M, Myers K, Mondala TS, Natarajan P, Head SR, Alvarez-Garcia O, Lotz MK
Citation(s) 38403470
Submission date Apr 14, 2023
Last update date Apr 06, 2024
Contact name Padma Natarajan
Organization name The Scripps Research Institute
Department CCBB
Street address 10550 N.Torrey Pines Road
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (6)
GSM7173748 healthy annulus fibrosus (Thompson grade II) single cell RNAseq, donor1
GSM7173749 healthy annulus fibrosus (Thompson grade II) single cell RNAseq, donor2
GSM7173750 healthy annulus fibrosus (Thompson grade II) single cell RNAseq, donor3
This SubSeries is part of SuperSeries:
GSE230809 Intervertebral disc degeneration
BioProject PRJNA955672

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE229711_RAW.tar 442.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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