GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE229626 Query DataSets for GSE229626
Status Public on Oct 31, 2023
Title Gene expression profile at single cell level of human T cells stimulated via antibodies against the T Cell Receptor (TCR)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We used single cell RNA sequencing (scRNAseq) to compare gene expression in human T cells following stimulation with antibodies directed against a CD3 subunit (CD3ε) versus the TCRβ chain variable (V) domain
Overall design Purified human T cells from six healthy donors were stimulated with antibodies in vitro for 7 days and analyzed using scRNAseq
Contributor(s) Vantourout P, Eum J, Conde Poole M, Hayday TS, Laing AG, Hussain K, Nuamah R, Kannambath S, Moisan J, Stoop A, Battaglia S, Servattalab R, Hsu J, Bayliffe A, Katragadda M, Hayday AC
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 13, 2023
Last update date Oct 31, 2023
Contact name Jonathan Hsu
Organization name Marengo Therapeutics
Street address 840 Memorial Dr 4th Floor
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (18)
GSM7169472 Donor_4_GEX
GSM7169473 Donor_5_GEX
GSM7169474 Donor_9_GEX
BioProject PRJNA955186

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE229626_4_vloupe.vloupe.gz 3.8 Mb (ftp)(http) VLOUPE
GSE229626_5_vloupe.vloupe.gz 743.2 Kb (ftp)(http) VLOUPE
GSE229626_64_vloupe.vloupe.gz 1.4 Mb (ftp)(http) VLOUPE
GSE229626_89_vloupe.vloupe.gz 1.5 Mb (ftp)(http) VLOUPE
GSE229626_93_vloupe.vloupe.gz 2.9 Mb (ftp)(http) VLOUPE
GSE229626_9_vloupe.vloupe.gz 1.9 Mb (ftp)(http) VLOUPE
GSE229626_barcodes.tsv.gz 221.6 Kb (ftp)(http) TSV
GSE229626_features.tsv.gz 325.9 Kb (ftp)(http) TSV
GSE229626_matrix.mtx.gz 295.6 Mb (ftp)(http) MTX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap