NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE22959 Query DataSets for GSE22959
Status Public on Dec 06, 2011
Title Sequencing of the non-ribosomal transcriptome allows the simultaneous identification of protein-coding and non-protein-coding RNAs
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Deep Sequencing of protein-coding and non-protein-coding RNAs from mouse differentiated embryonic stem cells and 14.5dpc mouse fetal head
 
Overall design Analysis of Ribominus RNA from mouse differentiated embryonic stem cells and 14.5dpc mouse fetal head

There are no processed data files for GSM566806-GSM566811. There are no fastq raw data files for GSM566812 and GSM566813 since these samples are the combined reads from all sequence lanes.
 
Contributor(s) Huang R, Pauler FM, Jaritz M, Sommer A, Tamir IM, Marks H, Stunnenberg HG, Barlow DP
Citation(s) 22102886
Submission date Jul 15, 2010
Last update date May 15, 2019
Contact name Florian M Pauler
E-mail(s) florian.pauler@ist.ac.at
Phone +43 2243 9000-7434
Organization name IST Austria
Lab Simon Hippenmeyer
Street address Am Campus 1
City Klosterneuburg
ZIP/Postal code 3400
Country Austria
 
Platforms (2)
GPL9185 Illumina Genome Analyzer (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (24)
GSM566792 Ribominus total RNA from ES 1
GSM566793 Ribominus total RNA from ES 2
GSM566794 Ribominus total RNA from ES 3
Relations
SRA SRP002888
BioProject PRJNA127845

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22959_RAW.tar 1.2 Gb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap