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Series GSE228622 Query DataSets for GSE228622
Status Public on Mar 04, 2024
Title Short Noncoding RNAs as predictive biomarkers for the development from Inflammatory Bowel Disease Unclassified to Crohn’s Disease or Ulcerative Colitis
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary To find predictive biomarkers for the development from inflammatory bowel disease unclassified (IBDU) to Crohn's disease(CD) or ulcerative colitis (UC), we performed short non-coding RNA profiling on IBDU patient samples at the time of diagnostic endoscopy.
 
Overall design Mucosal tissue biopsies from IBDU patients(35) who were reclassified to CD (IBDU-CD, 12), UC (IBDU-UC, 15) or remained as IBDU (IBDU-IBDU, 8)), and 8 IBD patients were used in the study.
*** NOTE FROM SUBMITTER: Raw data generated during the current study can not be made publicily available, which is in accordance with the rules concerning processing of personal data set out in the EU General Data Protection Regulation (GDPR) and the Danish Data Protection Act. Nonetheless, may a researcher have an interest in our data they are welcome to contact us and collaborate. The data that support the findings of this study can be requested from The National Secretariat for Bio- and Genome Bank Denmark, RBGB.sekretariat.herlev-og-gentofte-hospital@regionh.dk, Herlev Hospital, Borgmester Ib Juuls Vej 73, 2730 Herlev, Denmark. ***
Web link https://doi.org/10.1371/journal.pone.0297353
 
Contributor(s) James JP, Buhl Riis L, Malham M, Høgdall E, Langholz E, Nielsen BS
Citation(s) 38408066
Submission date Mar 30, 2023
Last update date Mar 04, 2024
Contact name Jaslin P James
E-mail(s) lene.buhl.riis@regionh.dk, jaslin.pallikkunnath.james@regionh.dk, jaslin.pj@gmail.com
Organization name Herlev hospital
Department Department of Pathology
Street address Borgmester Ib Juuls vej 1
City Herlev
ZIP/Postal code 2730
Country Denmark
 
Platforms (1)
GPL19117 [miRNA-4] Affymetrix Multispecies miRNA-4 Array
Samples (43)
GSM7134024 IBDU, SAMPLE 1
GSM7134025 IBDU, SAMPLE 2
GSM7134026 IBDU, SAMPLE 3
Relations
BioProject PRJNA952231

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Supplementary data files not provided
Processed data included within Sample table

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