NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE228613 Query DataSets for GSE228613
Status Public on Jan 01, 2024
Title Single-cell RNA-sequencing of osteocyte-derived mitochondria recipient cells in the intra-tibial injection of LLC1 cells murine model.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary LLC1 cells were injected into the tibia of DMP1-Cre PhAM mice to study the intercellular mitochondrial transfer in the bone microenvironment. We used single-cell RNA sequencing (scRNA-seq) to analyze the cellular heterogeneity of osteocyte-derived mitochondria recipient cells.
 
Overall design LLC1 cells were injected intra-tibially into DMP1-Cre PhAM mice. 14 days later tumor-bearing tibia were dissected and enzymatically dissociated into single cell suspension. Osteocyte-derived mitochondria recipient cells were isolated by fluorescence-activated cell sorting (FACS) according to the presence of Dendra2 signal and analyzed using scRNAseq.
 
Contributor(s) Zhou H, Zhang W, Gao J, Ye Z
Citation(s) 38232158
Submission date Mar 30, 2023
Last update date Jan 24, 2024
Contact name Zhaoming Ye
E-mail(s) yezhaoming@zju.edu.cn
Organization name The Second Affiliated Hospital, Zhejiang University School of Medicine
Street address 88 jiefang road
City hangzhou
ZIP/Postal code 310031
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (1)
GSM7133971 mitochondria-recipient cells in intratibial LLC model
Relations
BioProject PRJNA950443

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228613_RAW.tar 107.3 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap