GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE228424 Query DataSets for GSE228424
Status Public on Sep 20, 2023
Title Comparing the adrenal gland microbiota composition between healthy subjects and patient with adrenal corticoma
Organism Homo sapiens
Experiment type Other
Summary The aim of this study is to evaluate the presence of intratumoral microbiome in 26 human ACC tissues versus 9 healthy adrenals.
Overall design Total DNA was extracted from the biopsies of the subjects, amplified to collect amplicons of variable V3–V4 regions (primers 341F and 805R) of the bacterial 16s rRNA gene and sequenced with MiSeq (2x300bp) Illumina platform.
Contributor(s) Luconi M, Cantini G, Ramazzotti M, Amedei A, Di Gloria L, Niccolai E
Citation(s) 37695690
Submission date Mar 28, 2023
Last update date Sep 20, 2023
Contact name Matteo Ramazzotti
Organization name University of Florence
Department Experimental and Clinical Biomedical Sciences
Street address viale Morgagni 50
City Firenze
ZIP/Postal code 50134
Country Italy
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (35)
GSM7120521 Microbiota of adrenal gland from subject ACC7
GSM7120522 Microbiota of adrenal gland from subject ACC16
GSM7120523 Microbiota of adrenal gland from subject ACC17
BioProject PRJNA949665

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228424_feature_table.csv.gz 191.7 Kb (ftp)(http) CSV
GSE228424_filtered_dna-sequences.fasta.gz 613.4 Kb (ftp)(http) FASTA
GSE228424_taxonomy.tsv.gz 266.9 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap